成人大片

PLANT SC 2520WT - Microbiology and Biotechnology II

Waite Campus - Semester 1 - 2025

This course provides both an introduction to the biology of microorganisms relevant to the areas of agriculture, food and wine (including natural ecosystems), and an insight into how biotechnology can be used in industry to improve nutrition and sustainability of foods. Ethical issues, policies and consumer perspective concerning biotechnology for food production are also explored using current examples. Practical sessions provide an opportunity to learn techniques essential to the areas of Microbiology and Biotechnology including application of skills to undertake a group project on food fermentation or spoilage. The key concepts of the course are integrated into case studies, lectorials and workshops where students have the opportunity to apply their problem solving skills. For the first 6 weeks, lectures are shared with Microbiology for Viticulture and Oenology II and Microbiology and Invertebrate Biology II, whereas practical classes and tutorials for the three courses are co-timetabled but conducted at separate venues.

  • General Course Information
    Course Details
    Course Code PLANT SC 2520WT
    Course Microbiology and Biotechnology II
    Coordinating Unit Agricultural Science
    Term Semester 1
    Level Undergraduate
    Location/s Waite Campus
    Units 3
    Contact Up to 6 hours per week
    Available for Study Abroad and Exchange Y
    Incompatible PLANT SC 2500WT, OENOLOGY 2501WT or PLANT SC 3500WT
    Assumed Knowledge (BIOLOGY 1101 or BIOLOGY 1001) and (BIOLOGY 1201 or equivalent)
    Assessment Quizzes, exam, practical reports, group project
    Course Staff

    Course Coordinator: Associate Professor Jenny Mortimer

    Dr Karina Riggs
    Course Timetable

    The full timetable of all activities for this course can be accessed from .

  • Learning Outcomes
    Course Learning Outcomes
    On successful completion of this course, students will be able to:
    1. Describe the nature and activities of microorganisms and invertebrates in agriculture, food and wine


    2. Demonstrate an understanding of the growth,handling and identification of microorganisms


    3. Use a range of biotechnology techniques to improve the nutritive value of foods and sustainability of their production


    4. Discuss ethical issues and policies related to biotechnology and food production


    5. Demonstrate effective information handling and communication skills through individual and group work
    University Graduate Attributes

    This course will provide students with an opportunity to develop the Graduate Attribute(s) specified below:

    University Graduate Attribute Course Learning Outcome(s)

    Attribute 1: Deep discipline knowledge and intellectual breadth

    Graduates have comprehensive knowledge and understanding of their subject area, the ability to engage with different traditions of thought, and the ability to apply their knowledge in practice including in multi-disciplinary or multi-professional contexts.

    1-4

    Attribute 2: Creative and critical thinking, and problem solving

    Graduates are effective problems-solvers, able to apply critical, creative and evidence-based thinking to conceive innovative responses to future challenges.

    2-5

    Attribute 3: Teamwork and communication skills

    Graduates convey ideas and information effectively to a range of audiences for a variety of purposes and contribute in a positive and collaborative manner to achieving common goals.

    5

    Attribute 4: Professionalism and leadership readiness

    Graduates engage in professional behaviour and have the potential to be entrepreneurial and take leadership roles in their chosen occupations or careers and communities.

    5

    Attribute 5: Intercultural and ethical competency

    Graduates are responsible and effective global citizens whose personal values and practices are consistent with their roles as responsible members of society.

    4-5

    Attribute 7: Digital capabilities

    Graduates are well prepared for living, learning and working in a digital society.

    1-4

    Attribute 8: Self-awareness and emotional intelligence

    Graduates are self-aware and reflective; they are flexible and resilient and have the capacity to accept and give constructive feedback; they act with integrity and take responsibility for their actions.

    4-5
  • Learning Resources
    Required Resources
    A lab coat and closed foot wear must be worn in every practical session in the laboratory.
    Recommended Resources
    Recommended Reading

    Communication

    Cargill M and Bellotti M (2004) Written Communication in the Agricultural and Natural Resource Sciences. Theu 成人大片.
    General microbiology and bacteria

    Madigan MT. Bender KS and Sattley WM (2020) Brock Biology of Microorganisms (16th edn.). Pearson (earlier editions, 2012 onwards are also suitable).

    Willey JM, Sandman KM and Wood DH (2022) Prescott's Microbiology (11th edn.). McGraw-Hill (earlier editiions, 2014 onwards are also suitable).


    Fungi

    Deacon JW (2006) Fungal Biology (4th edn.). Blackwell Publishing.

    Gow NAR and Gadd GM (1995). The Growing Fungus. Chapman and Hall.

    Ingold CT and Hudson HJ (1993). The Biology of Fungi (6th edn.). Chapman and Hall.


    Applied Microbiology

    Agrios GN (1997, 2005, 2024 or electronic resource) Plant Pathology (4th, 5th, 6th edn.). Academic Press

    Fleet GH (1992) Wine Microbiology and and Biotechnology. Harwood Academic Publishers

    Fugelsang KC (1996) Wine Microbiology. Chapman and Hall

    Fugelsang KC and Edwards CG (electronic resource) Wine Microbiology. Springer.

    Pitt and Hocking AD (1997) Fungi and Food Spoilage (2nd edn). Blackie Academic Publishers.

    Pitt J and Hocking AD (electronic resource) Fungi and Food Spoilage (3rd edn.) Springer.


    Virology


    Hull R( 2009 or electronic resource) Comparative Plant Virology (2nd end.). Academic Press.

    Mahy BWJ, Van Regenmortel MVH et al. (2010) EDesk Encyclopedia of Plant and Fungal Virology. Academic Press.

    Wagner EK and Hewlett MJ (2004) Basic Virology (2nd edn.). Blackwell Publishing.


    Biotechnology


    Belitz HD, Grosch W and Schieberle (2009) Food Chemistry (4th edn.) Springer Verlaf. Berlin. 2nd edn onwards ok.

    Burton RA et al. (2006) Cellulose synthase-like CsIF genes mediate the synthesis of cell callus (1,3;1,4)-B-D-glucans. Science 311: 1940-1942.

    Collin P et al. (2004) The safe threshold for gluten contamination in gluten free products. Can trace amounts be accepted in the treatment of coeliac disease? Ailment Pharmacol Ther. 19: 1277-1283.

    Hansen HB et al. (2004) Grain characteristics, chemical composition and functional properties of rye as influenced by genotype and harvest year. J Agric Food Chem. 52: 2282-2291.

    Hischenhuber C et al. (2006) Review article: Safe amounts of gluten for patients with wheat allergy or coeliac disease. Ailment Phamrmacol Ther. 23: 559-575.

    Holtekjolen ADK et al. (2006) Contents of starch and non- starch polysaccharides in barley varieites of different food origin. Food Chem. 94: 348-358.

    Keegstra K and Walton J (2006) Beta-glucans: brewer's bane, dieticians delight. Science .311: 1872-1873.

    Shewry PR and Halford NG (2002) Cereal seed storage proteins: structures, properties and role in grain utilisation. J Exp Bot. 53: 947-958.

    Spaenij-dekking L et al. (2005) Natural variation in toxivity of wheat. Potential selection of non toxic varieties for coeliac disease patients. Gastroenterology. 129: 797-806.

    Tamine AY et al. (1998) Laboratory made Kishk from wheat, oat and barley: 1. Production and comparison of chemical and nutritional composition of Burghol. Food Res Intl. 30: 311-317.

    Online Learning
    Teaching and course materials will be posted in MyUni (). Lectures will be recorded and posted on MyUni. Tutorial topics for microbiology will be posted for discussion. A series of videos demonstrating common microbiological techniques will be available on MyUni. Interative pre-laboratory activities will be used in formative and summative assessment. Online quizzes will be available to help with review and revision (formative assessment).
  • Learning & Teaching Activities
    Learning & Teaching Modes

    Lectures are used to deliver content relevant to the specified course objectives. Lectures include the opportunity for open discussion, questions and problem solving activities. Selected biotechnology lectures are supported by formative pre-lecture online activities to support in class activities and discussions. The microbiology project work in weeks 4-6 allow students to synthesise and apply the skills learned in the course to address practical situations.

    Tutorials aim to develop and support the material covered in the lectures as well as provide a forum for acquiring skills and knowledge necessary to complete the assessment tasks. The tutorials take the form of class discussions, demonstrations and problem-solving activities.

    Practicals aim to apply the knowledge and skills covered in the lectures and tutorials linking theory to practice.

    Workload

    The information below is provided as a guide to assist students in engaging appropriately with the course requirements.

    A student enrolled in a 3 unit course, such as this, should expect to spend, on average 12 hours per week on the studies required. This includes both the formal contact time required to the course (e.g., lectures and practicals), as well as non-contact time (e.g., reading and revision).

    The information below is provided as a guide to assist students engaging appropriately with course requirements:
    Lectures: 2 hours per week
    Tutorials: 1 hour per week
    Practicals: 4 hours per week
    Reading: (lecture material and practical manual) and preparation for practicals and tutorials (including pre-laboratory online exercises): 6 hours per week
    Preparation of project poster: 6-8 hours (total)
    Revision for exams: 20 hours
    Estimated average weekly workload: 12 hours
    Learning Activities Summary

    Specific Course Requirements
    In-person attendance at practicals and tutorials is compulsory.

    Viewing of each week's lecture material (either online or in person) is required before the start of the tutorial and practical, as knowlegde of the material is relevant to the tutorial exercises and practical experiments.
  • Assessment

    The University's policy on Assessment for Coursework Programs is based on the following four principles:

    1. Assessment must encourage and reinforce learning.
    2. Assessment must enable robust and fair judgements about student performance.
    3. Assessment practices must be fair and equitable to students and give them the opportunity to demonstrate what they have learned.
    4. Assessment must maintain academic standards.

    Assessment Summary

    Assessment Task Type of assessment Percentage of total assessment for grading purposes Hurdle (Yes or No) Learning Outcome
    Online quizzes for learning and revision Formative

    0%

    No 1,2,4
    Online practical and tutorial quizzes Formative and summative

    5%

    No 1,2,4
    Practical reports

    1. Single & multicelled
        organisms

    2. Plant disease

    3. Identifying GMOs

    4. Recombinant proteins

    Summative
    30% (Total)


    5%

    5%

    10%

    10%
    No
    1,2,5

    1,2,5

    3,4,5

    3,4,5
    Microbiology project work & presentation Summative 20% No 1,2,5
    Final Written exam Summative 25-45% No 1,2,4,5
    Assessment Related Requirements

    To pass the course, a student must obtain 40% for the written exam(s) (i.e. 24 out of 60). Students who miss assessed practicals because of illness, bereavement (or other compassionate grounds) or unavoidable commitments are given an assignment in lieu of the assessment piece (replacement assessment). No other additional assessment is available for Practical Components.

    Assessment Detail
    Written examinations
    The written exam is taken at the end of semester. The exam accounts for 45% of the final mark (22.5% is for microbiology and 22.5% for biotechnology). The exams will assess the students’ knowledge, their ability to apply knowledge and their critical analysis skills. Questions will be set by each lecturer, with marks according to the number of lectures given.

    Assessment of practical and work:
    Formative assessment; tutorial classes will include diagnostic and formative assessment to review information and understanding of the course material. Tutorial discussion topics and quizzes will be posted on MyUni.

    Summative assessment and submission of work for assessment; instructions for format, content and submission of practical reports, tutorial work and project work will be provided by the lecturer concerned.

    Practical reports, account for 30% of the final mark as follows:

    Practical 1: Single and multi-celled microorganisms; individual report,
    template distributed in class, data entered in practical sessions 2 &
    3  and tutorial 2, due at end of practical 3, (5% of final mark), addresses
    learning objectives 2, 3, 8, 9.

    Practical 2: Plant disease; prepared in pairs, template distributed in class,
    report due at end of practical 5, (5% of final mark), addresses learning
    objectives 1, 2, 3, 4, 8, 9.

    Microbiology project report
    Microbiology project report (group poster). Microbial activities - experiments and interpretation; presented as one poster per group
    of students, instructions in practical manual and tutorial 3, formative review of progress in tutorial 4, due 10.10 am on specified date, 15% of final mark, addresses learning objectives 1, 4, 8, 9, 10

    Practical 3: Identifying Genetically Modified Organisms (GMOs); individual report including Aims, Introduction, Results,  Discussion & Conclusion, due in week 10,  (10% of final mark), addresses learning objectives 6, 7, 8, 9. 

    Practical 4: Purification and use of recombinant proteins; individual report focusing on data presentation and summarising key points from four different, but related experiments. A formative assessment component is included to provide students with feedback due in week 10 before submission of the final assessment task in week 12, (10% of final mark), addresses learning
    objectives 6, 7, 8, 9.

    Practical reports will be promptly assessed to provide continual feedback to students and a sense of progressive accomplishment in the course. Students will receive written feedback on each of practical reports submitted for assessment.

    Formative online pre-laboratory quizzes: completion before the laboratory class, including safety information relevant to the practical and activities including practice calculations, plotting graphs in Microsoft Excel and writing informative figure legends. There is one pre-laboratory quiz for each practical (4 for microbiology and 4 for biotechnology), due before the practical class, addresses learning objectives 1, 2, 3, 4, 5, 6, 8, 9.
    Submission

    A completed assessment cover sheet must be attached to each practical/tutorial report. Practical/tutorial reports are submitted in class, online to Turnitin or to a designated drop box. Students will be notified in class where to submit reports for assessment.

    A student who misses an assessed exercise of whose work is impaired through illness or equivalent may be offered a replacement assessment task for the microbiology section of the course.

    Staff endeavor to return marked assessments and provide feedback to students within 2 weeks of submission.

    Late submission of assessments: If an extension is not applied for, or not granted then a penalty for late submission will apply.  A penalty of 10% of the value of the assignment for each calendar day that the assignment is late (i.e. weekends count as 2 days), up to a maximum of 50% of the available marks will be applied. This means that an assignment that is 5 days late or more without an approved extension can only receive a maximum of 50% of the marks available for that assignment.

    Course Grading

    Grades for your performance in this course will be awarded in accordance with the following scheme:

    M10 (Coursework Mark Scheme)
    Grade Mark Description
    FNS   Fail No Submission
    F 1-49 Fail
    P 50-64 Pass
    C 65-74 Credit
    D 75-84 Distinction
    HD 85-100 High Distinction
    CN   Continuing
    NFE   No Formal Examination
    RP   Result Pending

    Further details of the grades/results can be obtained from Examinations.

    Grade Descriptors are available which provide a general guide to the standard of work that is expected at each grade level. More information at Assessment for Coursework Programs.

    Final results for this course will be made available through .

  • Student Feedback

    The University places a high priority on approaches to learning and teaching that enhance the student experience. Feedback is sought from students in a variety of ways including on-going engagement with staff, the use of online discussion boards and the use of Student Experience of Learning and Teaching (SELT) surveys as well as GOS surveys and Program reviews.

    SELTs are an important source of information to inform individual teaching practice, decisions about teaching duties, and course and program curriculum design. They enable the University to assess how effectively its learning environments and teaching practices facilitate student engagement and learning outcomes. Under the current SELT Policy (http://www.adelaide.edu.au/policies/101/) course SELTs are mandated and must be conducted at the conclusion of each term/semester/trimester for every course offering. Feedback on issues raised through course SELT surveys is made available to enrolled students through various resources (e.g. MyUni). In addition aggregated course SELT data is available.

    The University places a high priority on approaches tolearning and teaching that enhance the student experience. Feedback is sought from students in a variety of ways including on-going engagement with staff, the use of online discussion boards and the use of Student Experience of Learning and Teaching (SELT) surveys as well as GOS surveys and Program reviews.

    SELTs are an important source of information to inform individual teaching practice, decisions about teaching duties, and course and program curriculum design. They enable the University to assess how effectively its learning environments and teaching practices facilitate student engagement and learning outcomes. Under the current SELT Policy (http://www.adelaide.edu.au/policies/101/) course SELTs are mandated and must be conducted at the conclusion of each term/semester/trimester for every course offering. Feedback on issues raised through course SELT surveys is made available to enrolled students through various resources
    (e.g. MyUni). In addition aggregated course SELT data is available.

    In response to feedback from the program coordinator in 2016, timetabling has been changed so that the course remains on the same day for the entire semester to avoid clashes with courses on other campuses.








  • Student Support
  • Policies & Guidelines
  • Fraud Awareness

    Students are reminded that in order to maintain the academic integrity of all programs and courses, the university has a zero-tolerance approach to students offering money or significant value goods or services to any staff member who is involved in their teaching or assessment. Students offering lecturers or tutors or professional staff anything more than a small token of appreciation is totally unacceptable, in any circumstances. Staff members are obliged to report all such incidents to their supervisor/manager, who will refer them for action under the university's student鈥檚 disciplinary procedures.

The 成人大片 is committed to regular reviews of the courses and programs it offers to students. The 成人大片 therefore reserves the right to discontinue or vary programs and courses without notice. Please read the important information contained in the disclaimer.